Graphical models for protein structure: Difference between revisions

From formulasearchengine
Jump to navigation Jump to search
en>Amkilpatrick
en>Rjwilmsi
m →‎External links: Journal cites:, added 1 PMID, added 1 issue number using AWB (10354)
 
Line 1: Line 1:
[[File:wv cadv ecmwf small.gif|frame|right|alt=Contour advection animation|Contour advection simulation]]
Benchmade is likely one of the top rated knife producers with a number of the most generally appreciated knives in the industry. The Mini Griptilian features a drop-point stainless steel blade that is less than three″ in length. The deal with is crafted from stainless-steel and options Ebay Benchmade 940 ([http://www.thebestpocketknifereviews.com/benchmade-940-review/ my homepage]) an ergonomic design that [http://dallaskoreans.com/index.php?document_srl=382680&mid=Test enables] for the perfect grip. The defining feature of the Mini Griptilian is its distinctive Axis locking mechanism that's proprietary to Benchmade. The knife might be simply pulled into an open or closed place with the usage of thumb studs. The blade has a easy satin finish that offers little resistance while opening or closing it.<br><br>Effectively, that depends – in case you don’t care about knives, just go choose up a cheap Opinel knife online at Ragweeds Forge or a Tough Rider or Steel Warrior trapper or stockman from Smoky Mountain Knifeworks or from Ebay. They are going to do the job acceptably and be loads higher than any gas station knife. There is also the option of a really small fastened-blade knife that rides in a pocket, however most individuals favor a folding pocket knife (or are pressured because of state or local regulation to hold a folding knife). When you love a quality item, learn on –<br><br>This information gives the mandatory information to make an educated resolution about the best [http://danang360.info/tin-rao-vat/benchmade-osborne-axis-940 knife sharpener] for you. There are many issues and you may not know all the facts simply yet. Once I received my first whetstone as a young kid to sharpen my Cub Scout pocket knife, I had no idea tips on how to use it or that there was a plethora of decisions for making [http://jackasskorea.dothome.co.kr/xe/jackass_movie/144564 blades sharp]. I'm fairly sure that I didn’t make the pocket knife sharper however I feel I felt good concerning the course of. On the bottom of this page, the highest picks based in your individual wants are listed. Quick Reference Table<br><br>Begins with somebody's grandfather or father handing them their first pocket knife. Whether it is a Case knife, an Uncle Henry, or a Swiss military knife, that first knife holds a fascination that just won't let go. Starting your own knife assortment may nicely have begun simply so, or even with one thing [http://www.foxnews.com/us/2013/09/18/student-suspended-for-10-days-for-accidentally-bringing-pocket-knife-to/ emerson knives] you came across in an vintage retailer that caught your eye. There are some pitfalls to be avoided within the knife accumulating pastime, however- simply enough to show away a beginner on the unfortunate aspect of a raw deal.<br><br>Self protection and survival are two issues that should by no means be taken with no consideration. You shouldn't wait till the day when you are mugged by robbers with the intention to learn the importance of being prepared. It is rather unfortunate that tragedies usually come after we least anticipate. That is why you should [http://www.thebestpocketknifereviews.com/benchmade-940-review/ Benchmade 710 940] at all times have the very best pocket knife with you where ever you go. It is not essentially for self protection. The most effective knife can serve you in different events, while you free your way in the forest, and also when you find yourself about to be attacked by wild animals or even by hostile folks.<br><br>It's best that you simply go for one which has a clean blade. This is better than a serrated knife for slicing or possibly chopping. Also, there won't be any downside with regards to sharpening a easy blade knife. There are several knife sharpening methods that you could comply with, however it's always simpler to sharpen a smooth blade knife. So, individuals who steadily go for tenting trips or for trekking, usually favor taking a clean blade knife with them, quite than a serrated knife. Apart from this, there are a number of knife blade varieties you possibly can select from. But select the one that can be of great help to you.<br><br>First we should talk about what you want a knife for. The reply to that's easy, isn’t it? Knives have 1,000,000 and one makes use of. From slicing shavings off a stick to make tinder for a fireplace to cutting paracord or other cordage to lash your survival shelter collectively, you simply can’t actually match the utility of a great knife. All kidding aside, knives are extraordinarily helpful tools and no self-respecting Prepper would be caught with out one. A pointy instrument and the data of find out how to use it are one factor separating us from animals, proper?
 
'''Contour advection''' is a [[Lagrangian coordinates|Lagrangian method]]
of simulating the evolution of one or more contours or isolines of
a tracer as it is stirred by a moving fluid.
Consider a blob of dye injected into a river or stream: to first order it could be modelled by tracking only the motion of its outlines.
It is an excellent method for studying [[chaotic mixing]]:
even when advected by smooth or finitely-resolved velocity fields,
through a continuous process of stretching and folding,
these contours often develop into intricate [[fractals]].
The [[flow tracer|tracer]] is typically passive as in <ref name="Waugh_Plumb1994">{{Cite journal
| author1 = D. W. Waugh
| author2 = R. A. Plumb
| title = Contour advection with surgery: a technique for investigating the fine scale structure in tracer transport
| journal = [[Journal of the Atmospheric Sciences]]
| volume = 51
| issue = 4
| pages = 415&ndash;422
| year = 1994
}}
</ref>
but may also be active as in,<ref name="Dritschel1988">{{Cite journal
| author = D. G. Dritschel
| title = Contour surgery: A topological reconnection scheme
| journal = [[Journal of Computational Physics]]
| volume = 77
| pages = 240&ndash;266
| year = 1988
}}
</ref> representing a dynamical property of the fluid such as [[vorticity]].
At present, advection of contours is limited to two dimensions,
but generalizations to three dimensions are possible.
 
==Method==
 
First we need a set of points that accurately define the contour.
These points are [[advection|advected]] forward using a [[trajectory (meteorology)|trajectory]]
integration technique.
To maintain its integrity,
points must be added to or removed from the curve
at regular intervals based on some criterion or metric.
The most obvious criterion is to maintain the distance between adjacent points
within a certain interval.
A better method is to use curvature since fewer points are required for
the same level of precision.
The [[curvature]] of a two-dimensional, Cartesian curve is given as:
 
:<math>
\frac{1}{r} = \sqrt{\left ( \frac{\mathrm d^2 x}{\mathrm d s^2}\right )^2 +
              \left ( \frac{\mathrm d^2 y}{\mathrm d s^2} \right )^2}
</math>
 
where <math>r</math> is the radius of curvature
and <math>s</math> is the path.
We need to keep the fraction of arc traced out between two adjacent points,
<math>
r \Delta s
</math>, where <math>\Delta s</math> is the path difference between them,
roughly constant
 
In,<ref name="Mills2009">{{Cite journal
| author = Peter Mills
| title = Isoline retrieval: An optimal method for validation of advected contours
| journal = Computers & Geosciences
| volume = 35
| number = 11
| pages = 2020&ndash;2031
| year = 2009
| doi = 10.1016/j.cageo.2008.12.015
| url = http://peteysoft.users.sourceforge.net/Mills2009.pdf
}}
</ref>
[[cubic spline]] fitting is used both to calculate the curvature
and interpolate new points into the contour.
The spline, which
is fitted [[parametric equation|parametrically]],
returns a set of second-order derivatives.
 
===Surgery===
 
A powerful refinement to the technique involves cutting out filaments that have become too
narrow to be significant.
If the distance method of adding/removing points is used,
then it is relatively straight forward
to check the distances between all combinations of points.
If a distance between non-adjacent points is too small,  
then the two points are separated from their neighbours,
joined together and their neighbours joined also.
Points may then be removed if necessary.
Once we allow surgery, we allow [[multiply connected]] domains inside the same contour.
A piece of the contour only one point in length would be removed from the simulation.
The most challenging part of the exercise is keeping track of all the points in order
to reduce the number of distance calculations---see [[nearest neighbour search]].
If the curvature method is used,  
then it may be difficult to recognize when two sections of the contour
are close enough to apply the surgery because of differing spacing
in strongly curved versus relatively straight sections.<ref name="Dritschel1988"/>
 
==Validation==
 
Advected contours, e.g. of trace gases (such as ozone) in the stratosphere,
can be validated with satellite remote sensing instruments using a method called [[isoline retrieval]].
<ref name="Mills2009"/>
 
==External links==
* [http://ctraj.sourceforge.net ctraj]: A library for Lagrangian advection simulations.
 
==References==
 
<references/>
 
[[Category:Fluid dynamics]]
[[Category:Meteorology]]

Latest revision as of 11:20, 5 August 2014

Benchmade is likely one of the top rated knife producers with a number of the most generally appreciated knives in the industry. The Mini Griptilian features a drop-point stainless steel blade that is less than three″ in length. The deal with is crafted from stainless-steel and options Ebay Benchmade 940 (my homepage) an ergonomic design that enables for the perfect grip. The defining feature of the Mini Griptilian is its distinctive Axis locking mechanism that's proprietary to Benchmade. The knife might be simply pulled into an open or closed place with the usage of thumb studs. The blade has a easy satin finish that offers little resistance while opening or closing it.

Effectively, that depends – in case you don’t care about knives, just go choose up a cheap Opinel knife online at Ragweeds Forge or a Tough Rider or Steel Warrior trapper or stockman from Smoky Mountain Knifeworks or from Ebay. They are going to do the job acceptably and be loads higher than any gas station knife. There is also the option of a really small fastened-blade knife that rides in a pocket, however most individuals favor a folding pocket knife (or are pressured because of state or local regulation to hold a folding knife). When you love a quality item, learn on –

This information gives the mandatory information to make an educated resolution about the best knife sharpener for you. There are many issues and you may not know all the facts simply yet. Once I received my first whetstone as a young kid to sharpen my Cub Scout pocket knife, I had no idea tips on how to use it or that there was a plethora of decisions for making blades sharp. I'm fairly sure that I didn’t make the pocket knife sharper however I feel I felt good concerning the course of. On the bottom of this page, the highest picks based in your individual wants are listed. Quick Reference Table

Begins with somebody's grandfather or father handing them their first pocket knife. Whether it is a Case knife, an Uncle Henry, or a Swiss military knife, that first knife holds a fascination that just won't let go. Starting your own knife assortment may nicely have begun simply so, or even with one thing emerson knives you came across in an vintage retailer that caught your eye. There are some pitfalls to be avoided within the knife accumulating pastime, however- simply enough to show away a beginner on the unfortunate aspect of a raw deal.

Self protection and survival are two issues that should by no means be taken with no consideration. You shouldn't wait till the day when you are mugged by robbers with the intention to learn the importance of being prepared. It is rather unfortunate that tragedies usually come after we least anticipate. That is why you should Benchmade 710 940 at all times have the very best pocket knife with you where ever you go. It is not essentially for self protection. The most effective knife can serve you in different events, while you free your way in the forest, and also when you find yourself about to be attacked by wild animals or even by hostile folks.

It's best that you simply go for one which has a clean blade. This is better than a serrated knife for slicing or possibly chopping. Also, there won't be any downside with regards to sharpening a easy blade knife. There are several knife sharpening methods that you could comply with, however it's always simpler to sharpen a smooth blade knife. So, individuals who steadily go for tenting trips or for trekking, usually favor taking a clean blade knife with them, quite than a serrated knife. Apart from this, there are a number of knife blade varieties you possibly can select from. But select the one that can be of great help to you.

First we should talk about what you want a knife for. The reply to that's easy, isn’t it? Knives have 1,000,000 and one makes use of. From slicing shavings off a stick to make tinder for a fireplace to cutting paracord or other cordage to lash your survival shelter collectively, you simply can’t actually match the utility of a great knife. All kidding aside, knives are extraordinarily helpful tools and no self-respecting Prepper would be caught with out one. A pointy instrument and the data of find out how to use it are one factor separating us from animals, proper?